个人简介：

本科毕业于复旦大学数学系（2011），博士毕业于TTIC研究院（2017），师从许锦波教授。2018-2022年继续在微软研究院开展研究，2022至今复旦大学智能复杂体系基础理论与关键技术实验室担任青年研究员。致力于深度学习在生命科学和自然语言处理等交叉学科中的应用研究,并侧重于提高模型的精度和速度，解决模型在实践落地中的具体问题。在PLOS Computational Biology、Nucleic Acids Research、ACL、EMNLP、NAACL、NeurIPS、ICML等国际顶级刊物和会议上发表多篇论文,共计被引用超过2000次（据谷歌学术统计）。其中以共同一作身份研究并开发的算法获得了PLOS Computational Biology 2018年度的“突破/创新”奖项，相关成果还获得了The Critical Assessment of protein Structure Prediction 12 (CASP 12）接触图比赛预测的全球第一名。此外，有多个工作被有国际影响力的媒体报道，例如The Economics, Science, The New York Times, Adweek, The Register, Synced等。多次受邀参与国际顶级学术会议ECML-PKDD和EMNLP的程序委员会。

研究兴趣：

深度学习，自然语言处理，计算生物学

代表成果：

1.Yizhe Zhang, Siqi Sun, Xiang Gao, Yuwei Fang, Chris Brockett, Michel Galley, Jianfeng Gao, Bill Dolan, RetGen: A Joint framework for Retrieval and Grounded Text Generation Modeling, AAAI 2022

2.Siqi Sun*, Yen-Chun Chen*, Linjie Li, Shuohang Wang, Yuwei Fang, Jingjing Liu, Lightningdot: Pre-training visual-semantic embeddings for real-time image-text retrieval, NAACL 2021

3.Siqi Sun, Zhe Gan, Yu Cheng, Yuwei Fang, Shuohang Wang, Jingjing Liu, Contrastive Distillation on Intermediate Representations for Language Model Compression, EMNLP 2021

4.Yuwei Fang, Shuohang Wang, Zhe Gan, Siqi Sun, Jingjing Liu, Filter: An enhanced fusion method for cross-lingual language understanding, AAAI 2021

5.Yuwei Fang, Siqi Sun, Zhe Gan, Rohit Pillai, Shuohang Wang, Jingjing Liu, Hierarchical graph network for multi-hop question answering, EMNLP 2020

6.Yizhe Zhang, Siqi Sun, Michel Galley, Yen-Chun Chen, Chris Brockett, Xiang Gao, Jianfeng Gao, Jingjing Liu, Bill Dolan, Dialogpt: Large-scale generative pre-training for conversational response generation, ACL 2020

7.Chen Zhu, Yu Cheng, Zhe Gan, Siqi Sun, Tom Goldstein, Jingjing Liu, Freelb: Enhanced adversarial training for natural language understanding, ICLR 2019

8.Siqi Sun, Yu Cheng, Zhe Gan, Jingjing Liu, Patient knowledge distillation for bert model compression, EMNLP 2019

9.Sheng Wang, Siqi Sun, Jinbo Xu, Analysis of deep learning methods for blind protein contact prediction in CASP12, Proteins: Structure, Function, and Bioinformatics 2018

10.Sheng Wang*, Siqi Sun*, Zhen Li, Renyu Zhang, Jinbo Xu, Accurate de novo prediction of protein contact map by ultra-deep learning model, PLoS computational biology 2017

11.Qingming Tang*, Siqi Sun*, Jinbo Xu, Learning scale-free networks by dynamic node specific degree prior, ICML 2015

12.Siqi Sun, Mladen Kolar, Jinbo Xu, Learning structured densities via infinite dimensional exponential families, NeurIPS 2015

13.Siqi Sun*, Xinran Dong*, Yao Fu, Weidong Tian, An iterative network partition algorithm for accurate identification of dense network modules, Nucleic Acids Research 2012